Salting out method was used to isolate genomic DNA from 5 mL peripheral blood leukocytes [60 (link)]. The genotyping was performed by the PCR restriction fragment length polymorphism and TaqMan® allelic discrimination assays (Applied Biosystems 7500 Fast Real-Time PCR (Thermo Fisher Scientific, Walthan, MA, USA)) method, as described previously [8 (link),9 (link),10 (link),11 (link),12 (link)]. PCR mix without DNA sample was taken as negative control and the 10% of random samples were sequenced to confirm the results consistency.
Genetic Profiling of Multiple Biomarkers
Salting out method was used to isolate genomic DNA from 5 mL peripheral blood leukocytes [60 (link)]. The genotyping was performed by the PCR restriction fragment length polymorphism and TaqMan® allelic discrimination assays (Applied Biosystems 7500 Fast Real-Time PCR (Thermo Fisher Scientific, Walthan, MA, USA)) method, as described previously [8 (link),9 (link),10 (link),11 (link),12 (link)]. PCR mix without DNA sample was taken as negative control and the 10% of random samples were sequenced to confirm the results consistency.
Corresponding Organization : Sanjay Gandhi Post Graduate Institute of Medical Sciences
Other organizations : King George's Medical University
Variable analysis
- DR4:A>C (rs20576)
- DR4:G>A (rs6557634)
- FAS-1377G>A (rs2234767)
- FASL-844T>C (rs763110)
- DCC:C>G (rs2229080)
- DCC:A>G (rs4078288)
- DCC:C>T (rs7504990)
- DCC:A>G (rs714)
- PSCA:C>T (rs2294008)
- PSCA:G>A (rs2978974)
- ADRA2A-1291C>G (rs1801253)
- ADRB1 1165C>G (rs1800544)
- ADRB3 190T>C (rs4994)
- CYP17 T>C (rs2486758)
- Not explicitly mentioned
- Salting out method used to isolate genomic DNA from 5 mL peripheral blood leukocytes
- PCR restriction fragment length polymorphism and TaqMan® allelic discrimination assays used for genotyping
- PCR mix without DNA sample taken as negative control
- 10% of random samples sequenced to confirm results consistency
Annotations
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