Here we assume that the neural system is at least capable of exploiting the statistics arising from the stimulation given throughout the experiment and thus construct PDFs from all data (time points and pixels) for a given condition. Therefore, we pool data over the full time course from −1 to 1 s of the experiment. Thus, each image of the VSD data had a spatial configuration of 67 × 137 spatial data pixels after removal of the two rows/columns on each side of an image because of the median filter that was applied. Each trial (of a total of eight trials per condition) resulted in 288 LAIS values, based on an original data length of 298 samples and a history length (state dimension) of 10 pixels. The product of final image size and LAIS samples resulted in 2.64 · 106 data points per trial for the estimation of the PDF for each of the eight motion direction conditions. Due to computational limitations, LAIS estimates were performed on two blocks of four trials separately, resulting in 1.06 · 107 data points entering the estimation in JIDT.
Estimating Local Active Information Storage in Neural Activity
Here we assume that the neural system is at least capable of exploiting the statistics arising from the stimulation given throughout the experiment and thus construct PDFs from all data (time points and pixels) for a given condition. Therefore, we pool data over the full time course from −1 to 1 s of the experiment. Thus, each image of the VSD data had a spatial configuration of 67 × 137 spatial data pixels after removal of the two rows/columns on each side of an image because of the median filter that was applied. Each trial (of a total of eight trials per condition) resulted in 288 LAIS values, based on an original data length of 298 samples and a history length (state dimension) of 10 pixels. The product of final image size and LAIS samples resulted in 2.64 · 106 data points per trial for the estimation of the PDF for each of the eight motion direction conditions. Due to computational limitations, LAIS estimates were performed on two blocks of four trials separately, resulting in 1.06 · 107 data points entering the estimation in JIDT.
Corresponding Organization :
Other organizations : Goethe University Frankfurt, Commonwealth Scientific and Industrial Research Organisation, Technical University of Darmstadt, Max Planck Society, Max Planck Institute for Dynamics and Self-Organization
Protocol cited in 13 other protocols
Variable analysis
- Motion direction conditions
- LAIS (Local Active Information Storage)
- History parameter k_max of ten time points, spaced 2 samples apart (13.3 ms)
- Data pixels considered as homogeneous variables executing comparable state transitions
- Pooling data over pixels to enable an ensemble estimate of the PDFs
- Mutual information estimated using a box kernel-estimator with a kernel width of 0.5 standard deviations of the data
- Pooling data over the full time course from -1 to 1 s of the experiment
- Spatial configuration of 67 x 137 spatial data pixels after removal of the two rows/columns on each side of an image due to the median filter
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