Inflammation-Related Genetic Variant Identification
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Corresponding Organization :
Other organizations : The University of Texas MD Anderson Cancer Center, WinnMed, Mayo Clinic, Mayo Clinic in Florida, The University of Texas Southwestern Medical Center
Variable analysis
- Inflammatory-related genes defined based on a pre-defined inflammation panel
- Tagging SNPs within a 10kb flanking region of each candidate gene region identified using the Tagger pairwise method
- SNP genotyping results
- Genotyping data from the Caucasian population of the International HapMap Project
- Only SNPs that had genotype data from ≥95% of all samples and samples with genotype data from ≥95% of all SNPs were included in the final data report
- Positive control: Not explicitly mentioned
- Negative control: Not explicitly mentioned
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