U2OS cells stably expressing mGFP-Vpr grown on 35 mm gridded glass bottom dishes (MatTek Corporation) were subjected to light microscopy imaging. The resulting cells were fixed with Karnovsky’s fixative, then post-fixed, stained, and resin-embedded as described previously 81 (link), except that 2% OsO4 and 1% uranyl acetate were used. In addition, a graded series of Polybed resin (EMS) with ethanol was utilized (2:1 ethanol to resin, 1:1 ethanol to resin, and 1:2 ethanol to resin each for 1 hour). Finally, the cells were incubated at room temperature for approximately 48 hours in resin without activator, followed by a 4-hour incubation in resin with activator BDMA at 32 °C. The cells had a final exchange with degassed resin and were allowed to polymerize for 24 hours at 65 °C. The resin was separated from the glass coverslip by heat shock, and any remaining glass particles were removed by hydrofluoric acid treatment and subsequent washing in ddH2O. Regions of interest identified by light microscopy imaging were cut out with a jeweler’s saw and glued to resin blocks using super glue. Serial sections were cut en face on an ultramicrotome and collected on formvar-coated slot grids. Grids were post-stained with uranyl acetate and lead citrate according to standard protocols, then were carbon coated before being transferred to the TEM for tomography.
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