Expression of FR1 and FR2 was determined using isoform-specific antibodies (#MAB5646, R&D Systems; #103988, Abcam). Immunofluorescence staining was performed on permeabilized cells using a murine monoclonal antibody against NOTCH1 (3294, Abcam), and species-specific secondary antibodies linked to Alexa Fluor 488. Slides were mounted with Prolong Gold anti-fade reagents and counterstained with DAPI (Invitrogen). Images were acquired using a Zeiss LSM510 confocal microscope at 100× power. Cell surface NOTCH1 was evaluated by staining nonpermeabilized cells with monoclonal anti-human NOTCH1 antibody (#FAB5317P; R&D Systems) as previously described (Roti et al., 2013 (link)).
Quantifying NOTCH1 Signaling and Expression
Expression of FR1 and FR2 was determined using isoform-specific antibodies (#MAB5646, R&D Systems; #103988, Abcam). Immunofluorescence staining was performed on permeabilized cells using a murine monoclonal antibody against NOTCH1 (3294, Abcam), and species-specific secondary antibodies linked to Alexa Fluor 488. Slides were mounted with Prolong Gold anti-fade reagents and counterstained with DAPI (Invitrogen). Images were acquired using a Zeiss LSM510 confocal microscope at 100× power. Cell surface NOTCH1 was evaluated by staining nonpermeabilized cells with monoclonal anti-human NOTCH1 antibody (#FAB5317P; R&D Systems) as previously described (Roti et al., 2013 (link)).
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Corresponding Organization : Broad Institute
Other organizations : University of Parma, Cancer Genetics (United States), Columbia University, Memorial Sloan Kettering Cancer Center
Variable analysis
- Antibodies used for Western blot staining
- Antibodies used for immunofluorescence staining
- Antibodies used for cell surface NOTCH1 evaluation
- Expression of γ-secretase–cleaved NOTCH1
- Expression of the intracellular transcriptional activation domain of NOTCH1
- Expression of the C terminus of NOTCH1
- Expression of FR1 and FR2 isoforms
- Localization of NOTCH1 (permeabilized cells)
- Cell surface expression of NOTCH1
- Expression of actin
- Expression of vinculin
- Expression of GAPDH
- Antibodies specific for γ-secretase–cleaved NOTCH1 (Val1744; #4147 or #2421; Cell Signaling Technology)
- Antibody specific for the intracellular transcriptional activation domain of NOTCH1 (Hasserjian et al., 1996)
- Antibody specific for the C terminus of NOTCH1 (#SC-6014 [C-20]; Santa Cruz Biotechnology)
- Antibodies specific for FR1 and FR2 isoforms (#MAB5646, R&D Systems; #103988, Abcam)
- Monoclonal antibody against NOTCH1 (3294, Abcam)
- Antibodies specific for actin (#ACTN05; Thermo Fisher Scientific)
- Antibody specific for vinculin (#2907; Abcam)
- Antibody specific for GAPDH (#137179; Santa Cruz Biotechnology)
- Staining of nonpermeabilized cells with monoclonal anti-human NOTCH1 antibody (#FAB5317P; R&D Systems)
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