Phylogenetic Analysis and Functional Annotation of StFH Protein

The phylogenetic tree was drawn using the neighbor-joining (NJ) method [52 (link)]. The evolutionary distances in the tree were assumed using the Poisson correction method. The phylogenetic analyses were performed in MEGA7 [53 (link)]. The functional annotation and gene ontology (GO) classes of StFH protein were processed using the PANNZER (Protein ANNotation with Z-scoRE) server (http://ekhidna2.biocenter.helsinki.fi/sanspanz/, accessed on 1 May 2021) [54 (link)].

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Kurt F., Filiz E., Yildiz K, & Akbudak M.A. (2023). Genome-Wide Identification, Characterization and Expression Profiling of Potato (Solanum tuberosum) Frataxin (FH) Gene. Genes, 14(2), 468.

Publication 2023

Evolutionary Gene classes Protein Protein annotation Tree

Corresponding Organization : Akdeniz University

Other organizations : Muş Alparslan University

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Variable analysis

independent variables

Phylogenetic tree drawing method (neighbor-joining (NJ) method)
Evolutionary distance calculation method (Poisson correction method)

dependent variables

Phylogenetic tree

control variables

MEGA7 software for phylogenetic analyses
PANNZER (Protein ANNotation with Z-scoRE) server for functional annotation and gene ontology (GO) classes of StFH protein

Annotations

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