For Western blotting, 20 μg of proteins were separated on SDS-PAGE gels, and Western blotting was carried out as previously described (19 (link)). The primary rabbit antibodies against Gdt1p were previously produced in our lab (9 (link)) and antibodies for sfpHluorin detection were purchased from Chromotek (PABG1, 1:1000 dilution). Horseradish peroxidase–coupled anti-rabbit secondary IgG antibodies and Lumi-Light Western Blotting Substrate (Roche Diagnostics) were used, and chemiluminescence was captured using an Amersham Imager 600 (GE Healthcare) with automatic exposure time for high dynamic range.
Protein Extraction and Western Blot Analysis in L. lactis
For Western blotting, 20 μg of proteins were separated on SDS-PAGE gels, and Western blotting was carried out as previously described (19 (link)). The primary rabbit antibodies against Gdt1p were previously produced in our lab (9 (link)) and antibodies for sfpHluorin detection were purchased from Chromotek (PABG1, 1:1000 dilution). Horseradish peroxidase–coupled anti-rabbit secondary IgG antibodies and Lumi-Light Western Blotting Substrate (Roche Diagnostics) were used, and chemiluminescence was captured using an Amersham Imager 600 (GE Healthcare) with automatic exposure time for high dynamic range.
Variable analysis
- Centrifugation time (12 min)
- Centrifugation speed (1700g)
- Centrifugation temperature (4 °C)
- Lysis method (Precellys apparatus, 5 × 30 s at 5000 rpm)
- Protein extraction
- Protein quantification
- SDS-PAGE separation
- Western blotting
- Cell culture volume (50 ml)
- Washing buffer composition (300 mM NaCl, 10% glycerol, 50 mM Tris-HCl pH 8.0)
- Lysis buffer composition (300 mM NaCl, 10% glycerol, 1 mM PMSF, 1/2000 protease inhibitor cocktail, 2 mg/ml lysozyme, 50 mM Tris-HCl pH 8.0)
- Glass bead size (0.17–0.18 mm diameter)
- Centrifugation time and speed for cell debris removal (12 min at 5000 rpm at 4 °C)
- Protein amount for Western blotting (20 μg)
- Primary antibody (Gdt1p and sfpHluorin)
- Secondary antibody (HRP-coupled anti-rabbit IgG)
- Chemiluminescence detection (Lumi-Light Western Blotting Substrate)
- Not explicitly mentioned
- Not explicitly mentioned
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