Genomic DNA Extraction and Sequencing Library Preparation
Corresponding Organization : Shanghai Industrial Technology Institute
Other organizations : Inner Mongolia Agricultural University, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, Shanghai Institutes for Biological Sciences, Mongolian University of Science and Technology, University of Mohaghegh Ardabili, Mongolian Academy of Sciences, Institute of Chemistry and Chemical Technology, Inner Mongolia Academy of Agricultural & Animal Husbandry Sciences, Xinjiang Academy of Animal Science, Kalmyk State University, Kazakh National Agrarian Research University, Inner Mongolia Medical University, New Mongol Institute of Technology
Protocol cited in 63 other protocols
Variable analysis
- DNA extraction method (QIAamp DNA Blood Mini kit for blood samples, phenol–chloroform method for skin samples)
- DNA quality and integrity (measured by OD260/280 ratio and agarose gel electrophoresis)
- DNA fragment size (300–500 bp)
- Library preparation (end repair, 'A'-tailing, adapter ligation, size selection, and PCR amplification)
- Sequencing platform (Illumina HiSeq with standard paired-end mode)
- Blood sample volume (200 μl)
- Gel electrophoresis conditions (2% agarose gels)
- Positive control: None mentioned
- Negative control: None mentioned
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