Then, cells were fixed in 4% formaldehyde and subjected to proximity ligation assay. Finally, cells were kept in HEPES buffer, and images were taken with a Nikon Eclipse Ti spinning disk microscope equipped with a Nikon CFI Apo TIRF 100× 1.49 N.A. oil objective using 405 nm, 488 nm, and 561 nm lasers. Images were recorded using Visitron Systems software (Visitron Systems, Puchheim, Germany), and numbers of red dots were quantified using ImageJ.
TIRF Microscopy of Cellular Proximities
Then, cells were fixed in 4% formaldehyde and subjected to proximity ligation assay. Finally, cells were kept in HEPES buffer, and images were taken with a Nikon Eclipse Ti spinning disk microscope equipped with a Nikon CFI Apo TIRF 100× 1.49 N.A. oil objective using 405 nm, 488 nm, and 561 nm lasers. Images were recorded using Visitron Systems software (Visitron Systems, Puchheim, Germany), and numbers of red dots were quantified using ImageJ.
Corresponding Organization : Rutgers, The State University of New Jersey
Other organizations : University Medical Center Hamburg-Eppendorf, Universität Hamburg
Variable analysis
- Transfection of cortical cells with tagBFP2-CAAX plasmid and pMH4-SYN-EGFP-ER plasmid
- Numbers of red dots quantified using ImageJ
- Cells were fixed in 4% formaldehyde
- Cells were kept in HEPES buffer
- Images were taken with a Nikon Eclipse Ti spinning disk microscope equipped with a Nikon CFI Apo TIRF 100× 1.49 N.A. oil objective using 405 nm, 488 nm, and 561 nm lasers
- Images were recorded using Visitron Systems software (Visitron Systems, Puchheim, Germany)
- No positive or negative controls were explicitly mentioned in the input protocol.
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