Specimens were examined on a Zeiss AxioImager M2 microscope equipped with differential interference contrast (DIC) and epifluorescent illumination and were recorded with a Hamamatsu ORCA-R2 C10600 camera. A cell proliferation assay was performed by direct counting using a bacterial counting chamber (Hausser Scientific Partnership, Horsham, PA, USA) and DIC microscopy. A SYBR Green I/PI assay was performed to assess the viability of B. burgdorferi, as previously described.13 (link) The ratio of live (green) and dead (red) B. burgdorferi was calculated by counting the cells using a bacterial counting chamber and epifluorescence microscopy, as previously described.13 (link) For the aggregated cells, three representative images of each sample were captured for quantitative analysis. Image Pro-Plus software was applied to select the green (including yellow) and red (including orange) areas of different morphological forms to calculate the integrated fluorescence intensity (equal to area × average density or average intensity) of the red and green portions, as previously described.16