CRISPR/Cas9 Plasmid Generation for Gba1 and Ppt1 Genes
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Corresponding Organization : Yale University
Variable analysis
- Target sequences for Gba1 and Ppt1 sgRNA
- Generation of sgRNA-expressing constructs
- Use of the SpCas9 (pX551) and single-guide RNA (sgRNA, pX552) expression plasmids developed by the Zhang lab
- Use of the CRISPR design tool to select 20-nt target sequences
- Prioritization of sgRNA sequences based on minimal off-target effects
- Use of the SapI Fast Digest enzyme to digest pX552 plasmid
- Use of T7 DNA Ligase to ligate annealed oligos
- Use of One-Shot Stbl3 Chemically Competent Escherichia coli for transformation
- Use of Sanger sequencing to confirm correct sgRNA insertion using the U6 promoter-sequencing primer
- Positive control: The SpCas9 (pX551) and single-guide RNA (sgRNA, pX552) expression plasmids developed by the Zhang lab
- Negative control: Not explicitly mentioned
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