Photoaffinity Labeling of TLR7 with Propofol Analogues
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Corresponding Organization : Boston Children's Hospital
Other organizations : University of Pennsylvania, The University of Tokyo
Variable analysis
- Concentration of aziPm (10 μM)
- Concentration of azi-fropofol (50 μM)
- Presence of propofol (200 μM) during photolabeling of TLR7 with aziPm
- Presence of fropofol (100 μM) during photolabeling of TLR7 with azi-fropofol
- Mass modification of TLR7 protein by aziPm or azi-fropofol, detected by Sequest database search
- Concentration of TLR7 protein (1 mg/mL)
- Duration of equilibration between TLR7 and aziPm/azi-fropofol (10 min)
- Wavelength of light used for photolabeling (350 nm)
- Trypsin digestion of TLR7 protein
- Nano-LC column with online electrospray into LTQ linear ion trap
- Data acquisition using Xcalibur software
- Database search using Sequest software
- Photolabeling of TLR7 protein with aziPm or azi-fropofol in the absence of competing ligands (propofol or fropofol)
- Photolabeling of TLR7 protein with aziPm or azi-fropofol in the presence of competing ligands (propofol or fropofol)
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