ZNF423 Genotypes and ER-Mediated Transcription
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Corresponding Organization : RIKEN Center for Integrative Medical Sciences
Protocol cited in 6 other protocols
Variable analysis
- Genotypes of ZNF423 SNPs (homozygous variant, heterozygous, and homozygous wild-type)
- Concentrations of E2 (0, 0.00001, 0.0001, 0.001, 0.01, 0.1, 1.0 and 10 nM)
- Concentrations of 4-hydroxytamoxifen (10^-8, 10^-7, 10^-6 and 10^-5 μM) in the presence of 0.01 nM E2
- Concentrations of raloxifene (10^-6 to 10^-3 μM) in the presence of 0.01 nM E2
- Expression levels of ZNF423 and BRCA1, normalized to ERα expression
- Cell culture conditions (RPMI media, 15% FBS, 200 μg/ml Zeocin)
- Cell culture conditions prior to E2 treatment (RPMI media, 5% charcoal stripped FBS, 200 μg/ml Zeocin, 24 h incubation)
- Cell density (2x10^7 cells per cell line)
- Positive control: Cells stably transfected with ERα as described previously
- Negative control: Cells cultured in the absence of E2 (0 nM)
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