Accumbal NMUR2 staining was quantified using FIJI (ImageJ). Image background was subtracted using rolling ball radius of 100 pixels. To quantify neuronal cell bodies and synapses, the range for desired size of events was set to >10 pixels. This quantifies the number of NMUR2 positive cell bodies and synapses as “events.” To analyze images, the NAc was defined from the rat brain atlas (Paxinos and Watson, 2007 ), and the number of NMUR2 positive neuronal events were quantified.
Visualizing Accumbal NMUR2 Expression
Accumbal NMUR2 staining was quantified using FIJI (ImageJ). Image background was subtracted using rolling ball radius of 100 pixels. To quantify neuronal cell bodies and synapses, the range for desired size of events was set to >10 pixels. This quantifies the number of NMUR2 positive cell bodies and synapses as “events.” To analyze images, the NAc was defined from the rat brain atlas (Paxinos and Watson, 2007 ), and the number of NMUR2 positive neuronal events were quantified.
Corresponding Organization : The University of Texas Medical Branch at Galveston
Protocol cited in 1 other protocol
Variable analysis
- None explicitly mentioned
- Accumbal NMUR2 staining
- Number of NMUR2 positive neuronal events
- Tissue slices from an anterior to posterior range of the NAc (three slices from each rat at 2.76, 1.92 and 1.32 mm from Bregma)
- Tissue permeabilization and blocking with serum in phosphate buffered saline
- Incubation with rabbit αNMUR2 (1:150; NBP-02351, Novus Biologicals) primary antibody
- Incubation with donkey αrabbit AF-488 (1:100) secondary antibody
- Image acquisition using a Leica True Confocal Scanner SPE and Leica Application Suite Advanced Software with 20× objective and tile scan mode
- Image analysis using FIJI (ImageJ) software, including background subtraction and event size quantification
- None explicitly mentioned
- None explicitly mentioned
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