For the Tb927.11.6660-PTP construct, the ORF positions 2397 to 2805 were amplified as described above and cloned between the ApaI and EagI sites. We used SnaBI (NEB) to linearize the plasmid prior to transfection.
Tagging and RNAi of Trypanosome Proteins
For the Tb927.11.6660-PTP construct, the ORF positions 2397 to 2805 were amplified as described above and cloned between the ApaI and EagI sites. We used SnaBI (NEB) to linearize the plasmid prior to transfection.
Corresponding Organization :
Other organizations : University of Bern, University of Geneva
Protocol cited in 1 other protocol
Variable analysis
- Amplification of the TAP110 open reading frame (ORF) (Tb927.11.7590) positions 2242 to 2922 from genomic NYsm DNA
- Cloning of the TAP110 ORF (positions 2081 to 2629) into a tet-inducible RNAi vector
- Amplification and insertion of the TAP110 ORF without the stop codon into a modified pLew100 vector for overexpression
- Amplification of the Tb927.11.6660 ORF positions 2397 to 2805 and cloning between the ApaI and EagI sites
- Not explicitly mentioned
- Linearization of the resulting plasmids with restriction enzymes (XcmI, NotI HF, SnaBI) prior to transfection
- Positive control: Not mentioned
- Negative control: Not mentioned
Annotations
Based on most similar protocols
As authors may omit details in methods from publication, our AI will look for missing critical information across the 5 most similar protocols.
About PubCompare
Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.
We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.
However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.
Ready to get started?
Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required
Revolutionizing how scientists
search and build protocols!