For quantitative reverse-transcription PCR (qPCR), A. californica actin (ac-actin) was used as a reference gene to normalize the target gene expression. qPCR primers for ac-akh were designed based on the previously published sequence (11 (link)). qPCR of ac-akh was carried out using FastStart Universal SYBR Green mix (Roche, Indianapolis, IN) and calculated using the 2−ΔΔCT method (26 (link)). Each reaction contained 9 μL SYBR Green mix, 9 μL ultrapure water, 0.5 μM gene-specific primers, and 2 μL (for ac-actin and ac-akh) of cDNA. Forward and reverse primers were 5′-CACACTGTCCCCATCTACGA and 5′-CCAGCGAGATCCAATCTCAT for ac-actin, and 5′-TTAATACAGCGAACCGCAAA, and 5′-TCACAGTTCTGGGCAGGTATT for ac-akh.
Quantifying ac-AKH Expression in Aplysia
For quantitative reverse-transcription PCR (qPCR), A. californica actin (ac-actin) was used as a reference gene to normalize the target gene expression. qPCR primers for ac-akh were designed based on the previously published sequence (11 (link)). qPCR of ac-akh was carried out using FastStart Universal SYBR Green mix (Roche, Indianapolis, IN) and calculated using the 2−ΔΔCT method (26 (link)). Each reaction contained 9 μL SYBR Green mix, 9 μL ultrapure water, 0.5 μM gene-specific primers, and 2 μL (for ac-actin and ac-akh) of cDNA. Forward and reverse primers were 5′-CACACTGTCCCCATCTACGA and 5′-CCAGCGAGATCCAATCTCAT for ac-actin, and 5′-TTAATACAGCGAACCGCAAA, and 5′-TCACAGTTCTGGGCAGGTATT for ac-akh.
Corresponding Organization : University of Colorado Boulder
Variable analysis
- Injection of 500 μL ASW (from Experiment 1) into control animals
- Expression pattern of ac-AKH in the central nervous system (CNS), heart, kidney, gill, esophagus, crop, and intestine
- Tissue collection from control animals
- Snap-freezing of tissues on dry ice and storage at −70°C until RNA isolation
- Total RNA isolation using TRIzol reagent
- CDNA synthesis from 1 μg total RNA using QuantiTect Reverse Transcription Kit
- Use of ac-actin as a reference gene for normalization of target gene expression
- Primer sequences for ac-actin and ac-akh
- QPCR conditions using FastStart Universal SYBR Green mix
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