For immunofluorescence-based detection of PrPSc aggregates in astrocytes, 1 × 105 cells of prion-infected (22L, RML, and ME7) astrocytes were seeded in 12-well culture plate. Once 60–70% confluent, the cells were fixed with 4% paraformaldehyde for 30 min at room temperature, followed by quenching of autofluorescence (with 50 mm NH4Cl, 20 mm glycine) for 10 min at room temperature. The cells were permeablized with PBS containing 5% FBS and 0.3% Triton X-100 for 30 min followed by denaturation of PrPC and epitope retrieval of PrPSc by incubation with 6 m guanidine HCl for 10 min at room temperature as described previously (44 (link), 45 (link)). The cells were incubated with anti-PrP mAb 4H11 (diluted at 1:100 in PBS containing 5% FBS and 0.3% Triton X-100) overnight at 4 °C. Alexa Fluor 488 goat anti-mouse secondary antibody (Jackson Immunoresearch) was used (at 1:200 in PBS containing 5% FBS and 0.3% Triton X-100) for 1 h at room temperature to visualize immunofluorescence. 4′,6′-Diamino-2-phenylindole (1:5000 in PBS) was used as a nuclear stain. Glial fibrillary acidic protein rabbit pAb was purchased from DAKO (Z0334). All images were captured under 63× oil lens at the same acquisition settings from a Zeiss LSM 700 confocal microscope.
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