Cryo-EM Sample Preparation for hDGAT1
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Variable analysis
- Preparation of cryo grids using the Thermo Fisher Vitrobot Mark IV.
- Glow-discharging of Quantifoil R1.2/1.3 Cu grids in air for 40 sec at medium level using the Plasma Cleaner (Harrick Plasma, PDC-32G-2).
- Application of 3.5 μl of concentrated hDGAT1 to each glow-discharged grid.
- Blotting of grids with filter paper (Ted Pella, Inc. Prod.# 47000–100) for 3.5 sec.
- Plunging of grids into liquid ethane cooled with liquid nitrogen.
- Structural information of hDGAT1 protein obtained from the cryo-EM movie stacks.
- Microscope settings: Titan Krios at 300 kV with a Quantum energy filter (Gatan) and a Cs corrector (Thermo Fisher), at a nominal magnification of 105,000 ×.
- Defocus values: -2.0 μm to -1.2 μm.
- Electron detector: K2 Summit direct electron detector (Gatan) operated in super-resolution mode.
- Exposure time: 0.175 sec per frame for a total of 32 frames.
- Electron dose: about 50 e-/Å2 for each stack.
- Motion correction and binning: MotionCor2 with 2×2 binning, resulting in a pixel size of 1.114 Å.
- Dose weighting and defocus estimation: Performed during motion correction using Gctf.
- No positive or negative controls were explicitly mentioned in the provided information.
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