Micrographs were acquired on a Titan Krios (ThermoFisher Scientific) transmission electron microscope, operated at 300 kV and equipped with a Gatan Quantum-LS imaging energy filter (GIF, 20 eV zero loss energy window; Gatan Inc). Images were recorded on a K2 Summit electron counting direct detection camera (Gatan Inc) in dose fractionation mode (50 frames) using the Serial EM software (Mastronarde, 2005 (link)) at pixel sizes of 0.831 Å or 0.629 Å, and a total dose of ~69 electrons per square Angstrom (e-/Å2) for each micrograph. Micrographs were processed and analyzed during data collection with FOCUS (Biyani et al., 2017 (link)), applying drift-correction and dose-weighting using MotionCor2 (Zheng et al., 2017 (link)). Specific data collection parameters for the various datasets are detailed in
Cryo-EM Imaging Using Leica EM GP and Titan Krios
Micrographs were acquired on a Titan Krios (ThermoFisher Scientific) transmission electron microscope, operated at 300 kV and equipped with a Gatan Quantum-LS imaging energy filter (GIF, 20 eV zero loss energy window; Gatan Inc). Images were recorded on a K2 Summit electron counting direct detection camera (Gatan Inc) in dose fractionation mode (50 frames) using the Serial EM software (Mastronarde, 2005 (link)) at pixel sizes of 0.831 Å or 0.629 Å, and a total dose of ~69 electrons per square Angstrom (e-/Å2) for each micrograph. Micrographs were processed and analyzed during data collection with FOCUS (Biyani et al., 2017 (link)), applying drift-correction and dose-weighting using MotionCor2 (Zheng et al., 2017 (link)). Specific data collection parameters for the various datasets are detailed in
Corresponding Organization :
Other organizations : University of Basel, Novo Nordisk Foundation, University of Copenhagen, Emory University, Institut de Biologie Intégrative de la Cellule, Université Paris-Sud, Université Paris-Saclay, Centre National de la Recherche Scientifique, CEA Paris-Saclay, Commissariat à l'Énergie Atomique et aux Énergies Alternatives, Direction de la Recherche Fondamentale, CEA Paris-Saclay - Etablissement de Fontenay-aux-roses, ETH Zurich, Roche (Switzerland), MRC Laboratory of Molecular Biology, Institut Galien Paris-Saclay, Université Claude Bernard Lyon 1
Variable analysis
- Grid preparation method (Leica EM GP automatic plunge freezer with 80% humidity at 20°C)
- Blotting time (60 s)
- Electron microscope (Titan Krios, ThermoFisher Scientific) operated at 300 kV
- Imaging energy filter (Gatan Quantum-LS, 20 eV zero loss energy window)
- Electron detection camera (K2 Summit, Gatan Inc) in dose fractionation mode (50 frames)
- Pixel size (0.831 Å or 0.629 Å)
- Total electron dose (~69 e-/Å2)
- Micrograph quality (drift-corrected and dose-weighted)
- Grid type (300 mesh, copper Quantifoil grids, R2/1)
- Grid pretreatment (glow-discharged for 60 s)
- Plunge freezing in liquid ethane cooled by liquid nitrogen
- No positive or negative controls were explicitly mentioned.
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