Six specimen of Owenia fusiformis were relaxed for immuno-histochemical investigations in a 7% MgCl2 seawater (1:1) solution and subsequently fixed in 4% paraformaldehyde in seawater. Animals were embedded into Gelatine-albumen (Sigma- Aldrich) and cut into sections of 60 μm thickness with a vibratome (HM 650 V Thermo-Scientific) or intact animals were used as whole mounts. Animals were stained with antibodies against FMRF-amide (ImmunoStar, Hudson, WI, USA), acetylated α-Tubulin (Sigma-Aldrich, Saint Louis, MO, USA) and for the nucleus staining Sytox (Invitrogen, Carlsbad, CA, USA). For a detailed description see Beckers et al. [51 (link)]. For whole mount staining the tissue of Owenia fusiformis was permeabilized using 2% Triton X-100 in PBS for 65 h in the fridge. Antibodies of rabbit anti- FMRF-amide (ImmunoStar, Hudson, WI, USA) and mouse α-tubulin (Sigma-Aldrich, Saint Louis, MO, USA) were applied for 3 days after blocking in 6% swine serum in PBS containing 0.5% Triton-X-100. Secondary antibodies were applied for 2 days at a dilution of 1: 1000. Animals were treated with Murray clear (benzyl benzoate + benzyl alcohol) and embedded therein on glass slides. Vibratome sections were embedded using Elvanol on glass slides. Afterwards the slide preparations were scanned with a Leica TCS SPE CLSM. Image stacks were further processed using Fiji (1. 52 h).
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