The negative-staining samples were prepared by mixing 2 µM protein with 500 µM unilamellar vesicles (with a diameter of 400 nm) in 20 mM Hepes buffer, pH 7.5, and 150 mM NaCl at RT for 5 min. The mixture was applied to the glow-discharged Pioloform (Agar Scientific)- and carbon-coated copper grids and stained with 3% uranyl acetate. At each step, excess solution was removed by filter paper. The membrane morphologies were examined with a JEM-1400 (Jeol) with a Orius SC 1000B bottom-mounted charge-coupled device camera (Gatan). The lipid composition of MIM used for EM was POPC:POPE:POPS:PI(4,5)P2:cardiolipin = 40:34:3:5:18. The final concentrations of FAM92A1 and lipid were 2 and 500 µM, respectively.
Transmission EM and Negative Staining of Protein-Lipid Interactions
The negative-staining samples were prepared by mixing 2 µM protein with 500 µM unilamellar vesicles (with a diameter of 400 nm) in 20 mM Hepes buffer, pH 7.5, and 150 mM NaCl at RT for 5 min. The mixture was applied to the glow-discharged Pioloform (Agar Scientific)- and carbon-coated copper grids and stained with 3% uranyl acetate. At each step, excess solution was removed by filter paper. The membrane morphologies were examined with a JEM-1400 (Jeol) with a Orius SC 1000B bottom-mounted charge-coupled device camera (Gatan). The lipid composition of MIM used for EM was POPC:POPE:POPS:PI(4,5)P2:cardiolipin = 40:34:3:5:18. The final concentrations of FAM92A1 and lipid were 2 and 500 µM, respectively.
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Variable analysis
- Protein concentration (2 µM)
- Lipid composition (POPC:POPE:POPS:PI(4,5)P2:cardiolipin = 40:34:3:5:18)
- Lipid vesicle diameter (400 nm)
- Membrane morphologies examined with electron microscopy
- Buffer composition (20 mM Hepes, pH 7.5, 150 mM NaCl)
- Temperature (room temperature)
- Incubation time (5 min)
- Staining (3% uranyl acetate)
- Positive control: Not explicitly mentioned.
- Negative control: Not explicitly mentioned.
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