Viral RNAs were extracted from 50 μL of serum with the EZ1 apparatus running the EZ1 DSP virus kit (Qiagen). Viral RNA levels were measured by a one-step quantitative reverse transcriptase PCR assay (RT-qPCR) on the Light Cycler 480 (Roche) with primers, probe, and cycling conditions previously described for USUV [68 (link)] and WNV [69 (link)].
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