For Drosophila samples, proteins were extracted in lysis buffer supplemented with Complete Protease Inhibitor Cocktail tablets from Roche (Basel, Switzerland). The protein extracts were obtained from 17 days old flies. Total protein was quantified using the DC Protein Assay, from Bio-Rad (CA, USA). For the western blot, we used anti-GFP (Clone 3H9, Catalog number 3h9-100), from Chromotek and anti-α-tubulin (Clone AA4.3, Catalog number RRID:AB_579793, Developmental Studies Hybridoma Bank, IA, USA).
Quantifying Alpha-Synuclein in Yeast and Drosophila
For Drosophila samples, proteins were extracted in lysis buffer supplemented with Complete Protease Inhibitor Cocktail tablets from Roche (Basel, Switzerland). The protein extracts were obtained from 17 days old flies. Total protein was quantified using the DC Protein Assay, from Bio-Rad (CA, USA). For the western blot, we used anti-GFP (Clone 3H9, Catalog number 3h9-100), from Chromotek and anti-α-tubulin (Clone AA4.3, Catalog number RRID:AB_579793, Developmental Studies Hybridoma Bank, IA, USA).
Corresponding Organization :
Other organizations : Instituto de Biologia Experimental e Tecnológica, Universidade Nova de Lisboa, James Hutton Institute, Delft University of Technology, German Center for Neurodegenerative Diseases
Variable analysis
- Protein extraction method (TBS buffer and glass bead lysis, or lysis buffer supplemented with Complete Protease Inhibitor Cocktail tablets)
- αSyn protein levels (measured by western blot)
- GFP and α-tubulin protein levels (measured by western blot)
- Presence of protease and phosphatase inhibitor cocktail during protein extraction
- Protein quantification method (Micro BCA Protein Assay Kit, or DC Protein Assay)
- Western blot procedure (standard procedures)
- Positive control: PGK, GAPDH, and CPY proteins for western blot
- Negative control: Not explicitly mentioned
Annotations
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