Quantitative Analysis of mRNA Expression via RT-qPCR
Corresponding Organization : Creighton University
Protocol cited in 4 other protocols
Variable analysis
- Treatment conditions (not explicitly specified)
- MRNA expression of the following genes:
- Cp18s (Cryptosporidium parvum 18S ribosomal RNA)
- Mip-2 (mouse chemokine C-X-C motif ligand 2)
- Nos2 (mouse nitric oxide synthase 2)
- Dkk1 (mouse Dkk1)
- Icam1 (mouse intercellular adhesion molecule 1)
- IL-6 (mouse interleukin 6)
- Lrp5 (mouse Lrp5)
- Wnt5a (mouse Wnt5a)
- Wnt3a (mouse Wnt family member 3a)
- Lgr5 (mouse Lgr5)
- Sox9 (Sox9)
- P16 (mouse cyclin-dependent kinase inhibitor 2A)
- SYBR Green PCR Master Mix (Applied Biosystems) for quantitative real-time PCR
- TRI-reagent for RNA extraction
- DNA-free™ Kit (Ambion) for DNA removal
- M-MLV Reverse Transcriptase (Invitrogen) for reverse transcription
- Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) as the endogenous reference gene for normalization
- Positive control: Not explicitly mentioned
- Negative control: Nontreated cells
Annotations
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As authors may omit details in methods from publication, our AI will look for missing critical information across the 5 most similar protocols.
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