Clinical signs and diagnostic test results were both used to classify calves as BRD cases or controls. Histophilus somni, Pasteurella multocida, Bibersteinia trehalosi and Mannheimia haemolytica were considered as aerobic pathogens when categorizing cases and controls (Griffin et al., 2010 (link)). Calves that met any of the following three criteria were classified as cases: (1) positive for BRSV, BHV-1, or BVDV on PCR; (2) any aerobic pathogen detected on culture and WI Score ≥5; or (3) any Mycoplasma spp. detected on culture and WI Score ≥5. All other calves were classified as controls. Figure 1 depicts the algorithm for the classification of BRD cases and controls. Bovine coronavirus was not included as a criterion for case definition because current PCR assays could not differentiate between enteric and respiratory BCoV subtypes (Saif, 2010 (link)).
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