Western Blotting Protocol for Phosphoproteins
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Corresponding Organization : Fox Chase Cancer Center
Other organizations : Thermo Fisher Scientific (United States)
Variable analysis
- Samples were harvested in MIB lysis buffer, subjected to SDS-PAGE chromatography and transferred to PVDF membranes before western blotting with primary antibodies.
- Western blot images were quantified using the Analyze>Gels function in Image J open source software (National Institutes of Health). Optical density values were normalized by sum (fig. S2, G–J) or by a fixed point (Fig. 4E, Fig. 5B and Fig. 7F).
- Phosphorylated proteins were normalized to loading control, then normalized to total abundance of the respective protein.
- Cells were harvested in a buffer containing 1% (w/v) SDS, 50 mM Tris pH 7.5 supplemented with protease and phosphatase inhibitors buffer and were passed through QIAshredder columns (Qiagen, 79654).
- Not explicitly mentioned.
- Not explicitly mentioned.
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