EAE was induced in eight to ten weeks old mice by subcutaneous immunization with 200 μg MOG35–55 peptide emulsified in complete Freund’s adjuvant (CFA, Difco Laboratories) per mouse, followed by administration of 200 ng pertussis toxin (PTX, List biological laboratories, Inc.) on days 0 and 2 as described26 (link). Clinical signs of EAE were assessed according to the following score: 0, no signs of disease; 1, loss of tone in the tail; 2, hind limb paresis; 3, hind limb paralysis; 4, tetraplegia; 5, moribund. Human Interferon-beta 1a (Rebif, Merck Serono) or vehicle control was administered daily at a dose of 5.000 IU intranasally or intraperitoneally as outlined in the specific experiments. Antibiotics, Trp-indoles, and TnAse were administered daily by oral gavage starting from day 22 after EAE induction at the following doses: Ampicillin 6 mg/20 g body weight (BW), vancomycin 3 mg/20 g BW; indole, indole-3-propionic acid, indole-3-aldehyde at 400 μg/20g BW, TnAse at 200 μg/20 g BW. I3S was administered daily intraperitoneally at a dose of 200 μg/20g BW. All agents were purchased from Sigma Aldrich.