Samples for COMET assay were prepared from 40 µl re-suspended BAL cells and 60 µl freezing media (HAM F-12, 1% penicillin/streptomycin, 15% fetal bovine serum and 10% DMSO). Samples were divided into two aliquots and immediately frozen at −80°C. The rest of the cell re-suspension (40 µl) was used to estimate the number of granulocytes (neutrophil and eosinophil), macrophages, lymphocytes, and epithelial cells in BAL fluid. The cell suspension was centrifuged at 55g for 4 min in Cytofuge 2 (StatSpin, TRIOLAB, Brøndby, Denmark) and fixed for 5 min in 96% ethanol. All slides were stained with May-Günewald-Giemsa stain, randomized, and blinded before counting 200 cells/sample under light microscope with 100 × magnification (using immersion oil). The numbers of counted cells were expressed as % observations based on cell distribution of the 200 counted cells multiplied with the total number of cells for each mouse. Lung and liver tissue were divided into 4 parts, snap frozen in liquid nitrogen, and stored at −80°C.
Murine Bronchoalveolar Lavage Fluid Analysis
Samples for COMET assay were prepared from 40 µl re-suspended BAL cells and 60 µl freezing media (HAM F-12, 1% penicillin/streptomycin, 15% fetal bovine serum and 10% DMSO). Samples were divided into two aliquots and immediately frozen at −80°C. The rest of the cell re-suspension (40 µl) was used to estimate the number of granulocytes (neutrophil and eosinophil), macrophages, lymphocytes, and epithelial cells in BAL fluid. The cell suspension was centrifuged at 55g for 4 min in Cytofuge 2 (StatSpin, TRIOLAB, Brøndby, Denmark) and fixed for 5 min in 96% ethanol. All slides were stained with May-Günewald-Giemsa stain, randomized, and blinded before counting 200 cells/sample under light microscope with 100 × magnification (using immersion oil). The numbers of counted cells were expressed as % observations based on cell distribution of the 200 counted cells multiplied with the total number of cells for each mouse. Lung and liver tissue were divided into 4 parts, snap frozen in liquid nitrogen, and stored at −80°C.
Partial Protocol Preview
This section provides a glimpse into the protocol.
The remaining content is hidden due to licensing restrictions, but the full text is available at the following link:
Access Free Full Text.
Corresponding Organization : Technical University of Denmark
Protocol cited in 7 other protocols
Variable analysis
- Anesthetization method (subcutaneous injection of Hypnorm/Dormicum mixture)
- Total number of living and dead cells in BAL
- Percentage of granulocytes (neutrophil and eosinophil), macrophages, lymphocytes, and epithelial cells in BAL fluid
- Sterile 0.9% NaCl solution used for lung flushing
- Cell suspension media (HAM F-12 with 1% penicillin/streptomycin and 10% fetal bovine serum)
- Freezing media (HAM F-12, 1% penicillin/streptomycin, 15% fetal bovine serum and 10% DMSO)
- Cytofuge 2 centrifugation parameters (55g for 4 min)
- Staining method (May-Günewald-Giemsa)
- Microscopy (100x magnification with immersion oil)
- No positive or negative controls were explicitly mentioned in the input protocol.
Annotations
Based on most similar protocols
As authors may omit details in methods from publication, our AI will look for missing critical information across the 5 most similar protocols.
About PubCompare
Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.
We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.
However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.
Ready to get started?
Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required
Revolutionizing how scientists
search and build protocols!