A plasmid-encoding, human full-length PDI was a kind gift from Dr. L. W. Ruddock (Faculty of Biochemistry and Molecular Medicine, University of Oulu). The gene for PDI 1-491 was constructed in a prokaryotic expression vector pET23, and a PDI mutant dnPDI was constructed by site-directed mutagenesis using a wild-type PDI template; the primers are shown in table S1. All PDI plasmids were transformed into Escherichia coli. Recombinant full-length wild-type human PDI (residues 1-491) and its variant dnPDI were expressed from the vector pET23 in E. coli BL21 (DE3) Codon plus-RIL cells (Novagen, Merck, Darmstadt, Germany). PDI proteins were purified to homogeneity by nickel affinity chromatography as described by Wang et al. (71) . The eluted fractions were dialyzed against 50 mM Tris-HCl buffer (pH 8.0) containing 150 mM NaCl twice to remove EDTA. The PDI proteins were freshly used or stored at -80 °C. SDS-PAGE was used to confirm that the purified human PDI proteins were single species. We used a UV-2550 Probe spectrophotometer (Shimadzu, Kyoto, Japan) to determine the concentrations of wild-type human PDI and dnPDI, using their absorbances at 214 nm with a standard calibration curve drawn by BSA.
Purification of TDP-43 and PDI Proteins
A plasmid-encoding, human full-length PDI was a kind gift from Dr. L. W. Ruddock (Faculty of Biochemistry and Molecular Medicine, University of Oulu). The gene for PDI 1-491 was constructed in a prokaryotic expression vector pET23, and a PDI mutant dnPDI was constructed by site-directed mutagenesis using a wild-type PDI template; the primers are shown in table S1. All PDI plasmids were transformed into Escherichia coli. Recombinant full-length wild-type human PDI (residues 1-491) and its variant dnPDI were expressed from the vector pET23 in E. coli BL21 (DE3) Codon plus-RIL cells (Novagen, Merck, Darmstadt, Germany). PDI proteins were purified to homogeneity by nickel affinity chromatography as described by Wang et al. (71) . The eluted fractions were dialyzed against 50 mM Tris-HCl buffer (pH 8.0) containing 150 mM NaCl twice to remove EDTA. The PDI proteins were freshly used or stored at -80 °C. SDS-PAGE was used to confirm that the purified human PDI proteins were single species. We used a UV-2550 Probe spectrophotometer (Shimadzu, Kyoto, Japan) to determine the concentrations of wild-type human PDI and dnPDI, using their absorbances at 214 nm with a standard calibration curve drawn by BSA.
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Corresponding Organization : City University of Hong Kong, Shenzhen Research Institute
Other organizations : Peking University, Peking University Third Hospital, Dalian Medical University, First Affiliated Hospital of Dalian Medical University, Huazhong University of Science and Technology, Sichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital, University of Electronic Science and Technology of China
Variable analysis
- Plasmid-encoding, human full-length TDP-43
- Plasmid-encoding, human full-length PDI
- PDI mutant dnPDI
- Purification of recombinant, full-length wild-type human TDP-43 (residues 1-414) containing a polyhistidine tag
- Purification of recombinant, full-length wild-type human PDI (residues 1-491) and its variant dnPDI
- E. coli BL21 (DE3) cells used for expression of TDP-43 and PDI proteins
- Nickel affinity chromatography used for purification of TDP-43 and PDI proteins
- Dialysis against 50 mM Tris-HCl buffer (pH 8.0) containing 150 mM NaCl to remove detergents and salts
- Centrifugation at 17,000 g for 30 min at 4 °C to remove large aggregates
- SDS-PAGE used to confirm purity of TDP-43 and PDI proteins
- Protein concentration determination methods (BCA assay for TDP-43, UV-2550 spectrophotometer for PDI)
- None mentioned
- None mentioned
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