Analyzing TaRCC1 Gene Expression Patterns

To analyze the tissue-specific and stress-induced expression of TaRCC1 genes, the RNA-seq expression data of five publicly available studies (International Wheat Genome Sequencing, C 2014 (link); Zhang et al., 2014 (link); Li et al., 2015 (link); Liu et al., 2015 (link); Zhang et al., 2016 (link)
) were obtained from expVIP Wheat Expression Browser (http://www.wheat-expression.com/) (Ramirez-Gonzalez et al., 2018 (link)
) and Triticeae Multi-omics Center (http://202.194.139.32/expression/index.html) and then visualized using the pheatmap package of R software.

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An X., Zhao S., Luo X., Chen C., Liu T., Li W., Zou L, & Sun C. (2023). Genome-wide identification and expression analysis of the regulator of chromosome condensation 1 gene family in wheat (Triticum aestivum L.). Frontiers in Plant Science, 14, 1124905.

Publication 2023

Expression genes Genome Rna seq Tissue specific Wheat

Corresponding Organization :

Other organizations : ZheJiang Academy of Agricultural Sciences, Cotton Research Institute

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Variable analysis

independent variables

Tissue-specific expression of TaRCC1 genes
Stress-induced expression of TaRCC1 genes

dependent variables

RNA-seq expression data of TaRCC1 genes

control variables

Five publicly available studies on wheat gene expression from different research groups

controls

No positive or negative controls were explicitly mentioned.

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