Caspase-3 activity was evaluated as a marker of cell death [19 (link),20 ], using the fluorogenic substrate DEVD-AFC (Ac-Asp-Glu-Val-Asp (DEVD)-pNA (Upstate Biotechnology). Samples were analyzed in a plate reader at 405 nm and enzymatic activity is expressed as arbitrary fluorescent units [20 ,21 ,33 (link)].
Quantifying Cell Marker Expression and Apoptosis
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Corresponding Organization : University of Catania
Other organizations : Wellcome/MRC Cambridge Stem Cell Institute, University of Cambridge
Variable analysis
- Fixation with 4% paraformaldehyde in PBS or paraformaldehyde/PBS followed by ice-cold acidic ethanol and HCL for BrdU staining
- Amount of cells expressing a given marker or marker combinations
- Caspase-3 activity as a marker of cell death
- Total number of DAPI-labeled nuclei or Tuj1+ cells
- Fluorogenic substrate DEVD-AFC (Ac-Asp-Glu-Val-Asp (DEVD)-pNA) for Caspase-3 activity
- Not explicitly mentioned
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