DNA was subcloned from plasmid constructs gifted by C. Moens (University of Washington, Seattle, Washington, USA) containing full-length zebrafish sema3fa and sema3fb in pCR4 vectors, RNA transcribed by mMessageMachine (Ambion) and microinjected into one-cell-stage embryos. All MOs were from Genetools. One-cell-stage embryos were microinjected with pre-mRNA translation blocking MO to sema3fa (17 (link)) or splice blocking MO targeting the exon3/5 boundary of sema3fb, 5′TATGAAGCGATACTCACGTTTGTGT3′. Efficacy of sema3fb knockdown was confirmed by RT-PCR (Supplemental Figure 2). The control MO was CCTCTTACCTCAGTTACAATTTATA.
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