Cryo-EM Structural Analysis of 311-rsCSP
Corresponding Organization :
Other organizations : Scripps Research Institute, Johns Hopkins University, U.S. President's Malaria Initiative
Variable analysis
- Electron microscope type (120 keV Tecnai Spirit or 200 keV Talos 200 C)
- Electron micrograph datasets collected
- Nominal magnification (52,000X or 73,000X)
- Pixel size (2.05 Å/pix or 1.98 Å/pix)
- Defocus (-1.5μM)
- Total dose (25 e-/Å2)
- Room temperature imaging
- Tietz TVIPS CMOS 4k x 4k camera (Tecnai Spirit) or 4k × 4k CETA camera (Talos)
- Leginon for automated data collection
- Appion database for micrograph storage
- RELION for single particle analysis, including CTF estimation, particle picking, and reference-free 2D classification
- Previous negative stain reconstruction of 311-rsCSP, low-pass filtered to 60 Å, used as a reference for 3D classification
- C1 symmetry used for 3D refinement
- Positive control: Previous negative stain reconstruction of 311-rsCSP, low-pass filtered to 60 Å, used as a reference for 3D classification
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