Mice were fed mouse chow containing trimethoprim-sulfamethoxazole for 3 weeks to clear possible previous infections (72 (link)) and then allowed 2 weeks to clear the medication (73 (link)). Throughout experimentation, mice were maintained on an antibiotic regimen (500 mg/liter) in drinking water, alternating monthly between cephalexin and amoxicillin. Mice were intranasally infected with 0.5 × 106P. murina cysts (ATCC) intranasally on day 0 and day 7 and monitored for 20% weight loss and subjective moribund characteristics resulting from PCP. Before sacrifice, blood oxygen saturation was measured to indicate compromise of pulmonary function and active pneumonia via the MouseOx System (Starr Life Sciences, Oakmont, PA). Upon sacrifice via carbon dioxide asphyxiation, lungs were weighed to assess general fluid influx into lung parenchyma. Mice that did not reach a terminal endpoint were allowed to live a minimum of 150 days. Depletion of CD4 T cells was accomplished by intraperitoneal injection of 0.3 mg GK1.5 mAb (BioXcell, New Lebanon, NH; or PBS control) on days −4 and −1 before infection, and weekly thereafter. Depletion status was monitored by flow cytometry analysis of blood periodically throughout the experiment.